Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926328.1_cds_XP_016474389.1_66418
CDS Infomation

[gene=LOC107796159] [db_xref=GeneID:107796159] [protein=transcription factor BIM2-like isoform X2] [protein_id=XP_016474389.1] [location=complement(join(42260..42361,42476..42605,42972..43414,43949..44041,44121..44190,44484..44592,44676..44803,44892..44997,45251..45601,47342..47410,47519..47555))] [gbkey=CDS]
Sequence

ATGGAGCTGCCTCAGTCCAGAACTTTTGGAGCAGAAGGGAGGAAGAAGACGCATGACTTT
CTTTCACTGTATTCACCTATTGAACAAGATCCAAGACCTCCGCAAGGTGGCTACCTAAAA
ACTCATGATTTCTTGCAACCTCTGGAGCAAGCAAGGAAGACAGTTGGGAAAACAGAAACT
AAAGTTGAGGTAGAGGCTATAGAAAAGCCTCCTTCAGCAGCCCATATTCTTCCTGGTGGT
ATTGGCACCTATAGCATTTCTTATTTGCAGCAAAGGATTCCAACGCCAGAACCAAACATT
TTTGCTGTCACACAGACTAGTAGTACTGATAGAGAAGATAGAAACTCAAACTGCAGTTCT
TACTCGGGGAGTGGTTTCACAATATGGAATGAATCTGCCATCAAAAAGGGAAAGACAGGG
AAGGAGAATCTCGCCGGAGATAGACATGTTCTAAGAGGTATCAACATTGGAGGGCAACCC
ACAACATCGTTAGAACGGCAATCACAATTGTCTTCAAATCATAATCATAACACTGCAACC
TTGAGCACGCTCTCATCTGCTCCGCAACCATCAGCTTTCGAGAATCAGAGTTTCCTACAT
ATGATGAAATCAGCTACGAATGCACATGAAGAGGATGATGACGAAGAGGAAGAGTTTATT
GTCAAGAAAGAATCACCTTCACACTCCAGAGGAAATTTATCGGTGAGAGTCGATGGAAAA
AGTAGCGAACGGAAGCCAAATACTCCACGCTCAAAGCACTCAGCAACAGAGCAAAGAAGA
AGAAGCAAGATCAATGACAGATTTCTGAAGTTGAGAGAGATCATCCCTCGCAGTGACCAG
AAGAGAGACAAAGCATCATTCTTGCTGGAGGTTGTCGAATATATTCAATTCCTACAAGAG
AAAGTGCACAAGTATGAGGGATCATATCAAGGCTCGGAGAATAGACCTTCAATATTACCA
TGGAATAAGTGCCATCGTATGACTCAAGGTTTCATTGATCATTCTCAAGGCACAAACAGT
GCATCTAGTCCTGGAATTGTATGTGCTGGAAAGCTTGACGAGAGTAAAATTGCAATCTCT
GCTACAAGTCCTGTCAATGGACAGACACTAGAGCCAAACAGAATTTCCGCTGTGAAACAA
AGTAGTCAGCAGTCTGAATTAACAAACAAGGTAGCAACACTTTGTAAGCAACCAAACGCA
TTTCCATTTTGTGGGAGTACTAGCATAGCATCGCTACAGTCTAGACTGGCACCTGATGCT
GACTCATTGGAAGTGAAGTCCCAGTCTCAATATTGGCTTACCAGATCAAATATGACTGAT
TGTGCTGTTACAAATGATAAGCTAAAAGGCCAAGAGGTGTCTACAGAAGGTGGTACAATC
AGCATTTCCAGTGTCTATTCTCAAAGGTTGTTGAACACATTGAAACAAGCACTGCAGGAT
TCCGGAGTAGATTTGTCGCAAGCCAGTATGTCAGTGAAAATTGATCTTGGGAAAAGAGTA
AATGATAGTTTAAATGCTTCAGTGCCCAATGTTAAGGGTGACAACATTTCCACAAGCAAT
CTACTAAATCCACAGTTGATAGATACAAGCACAAGGGAGGAGTCTGTCCACGCCTTCAAA
CGGCTCAAAACGAGTTGA

Peptide Sequence

PEP ID

XP_016474389.1
PEP Infomation

PREDICTED: transcription factor BIM2-like isoform X2 [Nicotiana tabacum]
Sequence

MELPQSRTFGAEGRKKTHDFLSLYSPIEQDPRPPQGGYLKTHDFLQPLEQARKTVGKTET
KVEVEAIEKPPSAAHILPGGIGTYSISYLQQRIPTPEPNIFAVTQTSSTDREDRNSNCSS
YSGSGFTIWNESAIKKGKTGKENLAGDRHVLRGINIGGQPTTSLERQSQLSSNHNHNTAT
LSTLSSAPQPSAFENQSFLHMMKSATNAHEEDDDEEEEFIVKKESPSHSRGNLSVRVDGK
SSERKPNTPRSKHSATEQRRRSKINDRFLKLREIIPRSDQKRDKASFLLEVVEYIQFLQE
KVHKYEGSYQGSENRPSILPWNKCHRMTQGFIDHSQGTNSASSPGIVCAGKLDESKIAIS
ATSPVNGQTLEPNRISAVKQSSQQSELTNKVATLCKQPNAFPFCGSTSIASLQSRLAPDA
DSLEVKSQSQYWLTRSNMTDCAVTNDKLKGQEVSTEGGTISISSVYSQRLLNTLKQALQD
SGVDLSQASMSVKIDLGKRVNDSLNASVPNVKGDNISTSNLLNPQLIDTSTREESVHAFK
RLKTS

Transcript Sequence

Gene sequence data has not been registered.